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Roadmap for naming uncultivated Archaea and Bacteria

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dc.contributor.authorMurray, A. E.
dc.contributor.authorFreudenstein, J.
dc.contributor.authorGribaldo, S.
dc.contributor.authorHatzenpichler, R.
dc.contributor.authorHugenholtz, P.
dc.contributor.authorKämpfer, P.
dc.contributor.authorKonstantinidis, K. T.
dc.contributor.authorLane, C. E.
dc.contributor.authorPapke, R. T.
dc.contributor.authorParks, D. H.
dc.contributor.authorRossello Mora, R.
dc.contributor.authorStott, M. B.
dc.contributor.authorSutcliffe, I. C.
dc.contributor.authorThrash, J. C.
dc.contributor.authorVenter, S. N.
dc.contributor.authorWhitman, W. B.
dc.contributor.authorAcinas, S. G.
dc.contributor.authorAmann, R.
dc.contributor.authorAnantharaman, K.
dc.contributor.authorArmengaud, J.
dc.contributor.authorBaker, B. J.
dc.contributor.authorBarco, R. A.
dc.contributor.authorBode, H. B.
dc.contributor.authorBoyd, E. S.
dc.contributor.authorBrady, C. L.
dc.contributor.authorCarini, P.
dc.contributor.authorChain, P. S. G.
dc.contributor.authorColman, D. R.
dc.contributor.authorDe Angelis, K. M.
dc.contributor.authorRíos, M. A.
dc.contributor.authorDe los Santos, P. E.
dc.contributor.authorDunlap, C. A.
dc.contributor.authorEisen, J. A.
dc.contributor.authorEmerson, D.
dc.contributor.authorEttema, T. J. G.
dc.contributor.authorEveillard, D.
dc.contributor.authorGirguis, P. R.
dc.contributor.authorHentschel, U.
dc.contributor.authorHollibaugh, J. T.
dc.contributor.authorHug, L. A.
dc.contributor.authorInskeep, W. P.
dc.contributor.authorIvanova, E. P.
dc.contributor.authorKlenk, H. P.
dc.contributor.authorLi, W. J.
dc.contributor.authorLloyd, K. G.
dc.contributor.authorLöffler, F. E.
dc.contributor.authorMakhalanyane, T. P.
dc.contributor.authorMoser, D. P.
dc.contributor.authorNunoura, T.
dc.contributor.authorPalmer, Marike
dc.contributor.authorParro García, V.
dc.contributor.authorPedros Alió, C.
dc.contributor.authorProbst, A. J.
dc.contributor.authorSmits, T. H. M.
dc.contributor.authorSteen, A. D.
dc.contributor.authorSteenkamp, E. T.
dc.contributor.authorSpang, A.
dc.contributor.authorStewart, F. J.
dc.contributor.authorTiedje, J. M.
dc.contributor.authorVandamme, P.
dc.contributor.authorWagner, M.
dc.contributor.authorWang, F. P.
dc.contributor.authorYarza, P.
dc.contributor.authorHedlund, B. P.
dc.contributor.authorReysenbach, A. L.
dc.contributor.funderNational Science Foundation (NSF)
dc.contributor.orcidMurray, A. E. [0000-0001-5790-7584]
dc.contributor.orcidGribaldo, S. [0000-0002-7662-021X]
dc.contributor.orcidHatzenpichler, R. [0000-0002-5489-3444]
dc.contributor.orcidHugenholtz, P. [0000-0001-5386-7925]
dc.contributor.orcidLane, C. [0000-0003-2558-2767]
dc.contributor.orcidParks, D. H. [0000-0001-6662-9010]
dc.contributor.orcidStott, M. B. [0000-0002-2082-9460]
dc.contributor.orcidThrash, J. C. [0000-0003-0896-9986]
dc.contributor.orcidAnantharaman, K. [0000-0002-9584-2491]
dc.contributor.orcidArmegaud, J. [0000-0003-1589-445X]
dc.contributor.orcidBode, H. B. [0000-0001-6048-5909]
dc.contributor.orcidDe Angelis, K. M. [0000-0002-5585-4551]
dc.contributor.orcidDe los Santos, P. E. [0000-0003-2407-0284]
dc.contributor.orcidEisen, J. A. [0000-0002-0159-2197]
dc.contributor.orcidEttema, T. J. G. [0000-0002-6898-6377]
dc.contributor.orcidEveillard, D. [0000-0002-8162-7360]
dc.contributor.orcidHentschel, U. [0000-0003-0596-790X]
dc.contributor.orcidInskeep, W. P. [0000-0002-5203-817X]
dc.contributor.orcidKlenk, H. P. [0000-0001-6758-8150]
dc.contributor.orcidPalmer, M. [0000-0001-8395-8465]
dc.contributor.orcidProbst, A. [0000-0002-9392-6544]
dc.contributor.orcidSmits, T. H. M. [0000-0002-1237-235X]
dc.contributor.orcidSteen, A. D. [0000-0003-4297-4332]
dc.contributor.orcidSpang, A. [0000-0002-6518-8556]
dc.contributor.orcidWang, F. [0000-0002-3429-8410]
dc.contributor.orcidHedlund, B. [0000-0001-8530-0448]
dc.contributor.orcidReysenbach, A. L. [0000-0001-9130-7750]
dc.contributor.orcidAmann, R. [0000-0002-0846-7372]
dc.contributor.otherUnidad de Excelencia Científica María de Maeztu Centro de Astrobiología del Instituto Nacional de Técnica Aeroespacial y CSIC, MDM-2017-0737
dc.date.accessioned2021-04-19T10:52:47Z
dc.date.available2021-04-19T10:52:47Z
dc.date.issued2020-06-08
dc.description8 pages, 2 figures, 1 table, 2 boxes, supplementary information https://doi.org/10.1038/s41564-020-0733-x.-- Author Correction: Roadmap for naming uncultivated Archaea and Bacteria: n the version of this Consensus Statement originally published, Pablo Yarza was mistakenly not included in the author list. Also, in Supplementary Table 1, Alexander Jaffe was missing from the list of endorsees. These errors have now been corrected and the updated Supplementary Table 1 is available onlinees
dc.description.abstractThe assembly of single-amplified genomes (SAGs) and metagenome-assembled genomes (MAGs) has led to a surge in genome-based discoveries of members affiliated with Archaea and Bacteria, bringing with it a need to develop guidelines for nomenclature of uncultivated microorganisms. The International Code of Nomenclature of Prokaryotes (ICNP) only recognizes cultures as ‘type material’, thereby preventing the naming of uncultivated organisms. In this Consensus Statement, we propose two potential paths to solve this nomenclatural conundrum. One option is the adoption of previously proposed modifications to the ICNP to recognize DNA sequences as acceptable type material; the other option creates a nomenclatural code for uncultivated Archaea and Bacteria that could eventually be merged with the ICNP in the future. Regardless of the path taken, we believe that action is needed now within the scientific community to develop consistent rules for nomenclature of uncultivated taxa in order to provide clarity and stability, and to effectively communicate microbial diversityes
dc.description.peerreviewedPeer reviewes
dc.description.sponsorshipSupport for this effort was provided by the National Science Foundation (grant no. DEB-1841658). We extend deep appreciation to all who attended the Microbial Taxonomy 2018 seminars, the Microbial Systematics for the Next Decade workshop held in Hood River, Oregon, USA, in October 2018, and those that participated in subsequent; With funding from the Spanish government through the "María de Maeztu Unit of Excellence" accreditation (MDM-2017-0737).es
dc.identifier.citationNature Microbiology 5(8): 987-994 (2020)es
dc.identifier.doi10.1038/s41564-020-0733-x
dc.identifier.e-issn2058-5276
dc.identifier.funderhttp://dx.doi.org/10.13039/100000001
dc.identifier.otherhttps://www.nature.com/articles/s41564-020-0733-x
dc.identifier.urihttp://hdl.handle.net/20.500.12666/422
dc.language.isoenges
dc.publisherSpringer Nature Research Journalses
dc.relation.urihttps://creativecommons.org/licenses/by-nc-nd/4.0/
dc.rightsAttribution-NonCommercial-NoDerivatives 4.0 Internationales
dc.rights.accessRightsinfo:eu-repo/semantics/openAccess
dc.rights.licenseCopyright © 2020, The Author(s)
dc.subjectMicrobeses
dc.subjectTaxonomyes
dc.subjectGenomees
dc.subjectBacteriaes
dc.titleRoadmap for naming uncultivated Archaea and Bacteriaes
dc.typeinfo:eu-repo/semantics/articlees
dc.type.coarhttp://purl.org/coar/resource_type/c_6501
dc.type.hasVersioninfo:eu-repo/semantics/publishedVersion
dspace.entity.typePublication

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